CS 571 Operating Systems (Spring 2020)

Project 0a: Linux Utilities (Systems Programming Warm-up Project)

Important Dates and Other Stuff

Due Thursday, 02/06, midnight.

This project is to be done by yourself.

Tests: Read more about the tests, including how to run them, by reading the file linux-utilities/tester/README (i.e., type cat linux-utilities/tester/README.md to see what to do, or better yet, use mcat …?). Good luck!

GitLab Repo

We supply you with a testing framework that is written using bash script. You’ll fetch (fork) the initial software with git (a version control system). To learn more about git, look at the git user’s manual, or, if you are already familiar with other version control systems, you may find this CS-oriented overview of git useful.

The URL for the course git repository is https://git.gmu.edu/cs571-proj/linux-utilities. Don’t clone the git repo directly; instead, as described in the GitLab Setup instructions first fork that repo into your own private repo on our Mason GitLab server, then clone from that. You’ll commit you changes locally and push them to your private GitLab repo for grading.

Linux Utilities

Before beginning: Read this lab tutorial; it has some useful tips for programming in the C environment.

In this project, you’ll build a few different UNIX utilities, simple versions of commonly used commands like cat, ls, etc. We’ll call each of them a slightly different name to avoid confusion; for example, instead of cat, you’ll be implementing mcat (i.e., “mason” cat).

Objectives:

  • Re-familiarize yourself with the C programming language
  • Re-familiarize yourself with a shell / terminal / command-line of UNIX
  • Learn (as a side effect) how to use a proper code editor such as emacs
  • Learn a little about how UNIX utilities are implemented

While the project focuses upon writing simple C programs, you can see from the above that even that requires a bunch of other previous knowledge, including a basic idea of what a shell is and how to use the command line on some UNIX-based systems (e.g., Linux or macOS), how to use an editor such as emacs, and of course a basic understanding of C programming. If you do not have these skills already, this is not the right place to start.

Summary of what gets turned in:

  • A bunch of single .c files for each of the utilities below: mcat.c, mgrep.c, mzip.c, and munzip.c.
  • Each should compile successfully when compiled with the -Wall and -Werror flags.
  • Each should (hopefully) pass the tests we supply to you.

mcat

The program mcat is a simple program. Generally, it reads a file as specified by the user and prints its contents. A typical usage is as follows, in which the user wants to see the contents of main.c, and thus types:

prompt> ./mcat main.c
#include <stdio.h>
...

As shown, mcat reads the file main.c and prints out its contents. The “./” before the mcat above is a UNIX thing; it just tells the system which directory to find mcat in (in this case, in the “.” (dot) directory, which means the current working directory).

To create the mcat binary, you’ll be creating a single source file, mcat.c, and writing a little C code to implement this simplified version of cat. To compile this program, you will do the following:

prompt> gcc -o mcat mcat.c -Wall -Werror
prompt> 

This will make a single executable binary called mcat which you can then run as above.

You’ll need to learn how to use a few library routines from the C standard library (often called libc) to implement the source code for this program, which we’ll assume is in a file called mcat.c. All C code is automatically linked with the C library, which is full of useful functions you can call to implement your program. Learn more about the C library here and perhaps here1.

For this project, we recommend using the following routines to do file input and output: fopen(), fgets(), and fclose(). Whenever you use a new function like this, the first thing you should do is read about it – how else will you learn to use it properly?

On UNIX systems, the best way to read about such functions is to use what are called the man pages (short for manual). In our HTML/web-driven world, the man pages feel a bit antiquated, but they are useful and informative and generally quite easy to use.

To access the man page for fopen(), for example, just type the following at your UNIX shell prompt:

prompt> man fopen

Then, read! Reading man pages effectively takes practice; why not start learning now?

We will also give a simple overview here. The fopen() function “opens” a file, which is a common way in UNIX systems to begin the process of file access. In this case, opening a file just gives you back a pointer to a structure of type FILE, which can then be passed to other routines to read, write, etc.

Here is a typical usage of fopen():

FILE *fp = fopen("main.c", "r");
if (fp == NULL) {
    printf("cannot open file\n");
    exit(1);
}

A couple of points here. First, note that fopen() takes two arguments: the name of the file and the mode. The latter just indicates what we plan to do with the file. In this case, because we wish to read the file, we pass “r” as the second argument. Read the man pages to see what other options are available.

Second, note the critical checking of whether the fopen() actually succeeded. This is not Java where an exception will be thrown when things goes wrong; rather, it is C, and it is expected (in good programs, i.e., the only kind you’d want to write) that you always will check if the call succeeded. Reading the man page tells you the details of what is returned when an error is encountered; in this case, the macOS man page says:

Upon successful completion fopen(), fdopen(), freopen() and fmemopen() return a FILE pointer.  Otherwise, NULL is returned and the global variable errno is set to indicate the error. 

Thus, as the code above does, please check that fopen() does not return NULL before trying to use the FILE pointer it returns.

Third, note that when the error case occurs, the program prints a message and then exits with error status of 1. In UNIX systems, it is traditional to return 0 upon success, and non-zero upon failure. Here, we will use 1 to indicate failure.

Side note: if fopen() does fail, there are many reasons possible as to why. You can use the functions perror() or strerror() to print out more about why the error occurred; learn about those on your own (using … you guessed it … the man pages!).

Once a file is open, there are many different ways to read from it. The one we’re suggesting here to you is fgets(), which is used to get input from files, one line at a time.

To print out file contents, just use printf(). For example, after reading in a line with fgets() into a variable buffer, you can just print out the buffer as follows:

printf("%s", buffer);

Note that you should not add a newline (\n) character to the printf(), because that would be changing the output of the file to have extra newlines. Just print the exact contents of the read-in buffer (which, of course, many include a newline).

Finally, when you are done reading and printing, use fclose() to close the file (thus indicating you no longer need to read from it).

Details

  • Your program mcat can be invoked with one or more files on the command line; it should just print out each file in turn.
  • In all non-error cases, mcat should exit with status code 0, usually by returning a 0 from main() (or by calling exit(0)).
  • If no files are specified on the command line, mcat should just exit and return 0. Note that this is slightly different than the behavior of normal UNIX cat (if you’d like to, figure out the difference).
  • If the program tries to fopen() a file and fails, it should print the exact message “mcat: cannot open file” (followed by a newline) and exit with status code 1. If multiple files are specified on the command line, the files should be printed out in order until the end of the file list is reached or an error opening a file is reached (at which point the error message is printed and mcat exits).

mgrep

The second utility you will build is called mgrep, a variant of the UNIX tool grep. This tool looks through a file, line by line, trying to find a user-specified search term in the line. If a line has the word within it, the line is printed out, otherwise it is not.

Here is how a user would look for the term foo in the file bar.txt:

prompt> ./mgrep foo bar.txt
this line has foo in it
so does this foolish line; do you see where?
even this line, which has barfood in it, will be printed.

Details

  • Your program mgrep is always passed a search term and zero or more files to grep through (thus, more than one is possible). It should go through each line and see if the search term is in it; if so, the line should be printed, and if not, the line should be skipped.
  • The matching is case sensitive. Thus, if searching for foo, lines with Foo will not match.
  • Lines can be arbitrarily long (that is, you may see many many characters before you encounter a newline character, \n). mgrep should work as expected even with very long lines. For this, you might want to look into the getline() library call (instead of fgets()), or roll your own.
  • If mgrep is passed no command-line arguments, it should print “mgrep: searchterm [file …]” (followed by a newline) and exit with status 1.
  • If mgrep encounters a file that it cannot open, it should print “mgrep: cannot open file” (followed by a newline) and exit with status 1.
  • In all other cases, mgrep should exit with return code 0.
  • If a search term, but no file, is specified, mgrep should work, but instead of reading from a file, mgrep should read from standard input. Doing so is easy, because the file stream stdin is already open; you can use fgets() (or similar routines) to read from it.
  • For simplicity, if passed the empty string as a search string, mgrep can either match NO lines or match ALL lines, both are acceptable.

mzip and munzip

The next tools you will build come in a pair, because one (mzip) is a file compression tool, and the other (munzip) is a file decompression tool.

The type of compression used here is a simple form of compression called run-length encoding (RLE). RLE is quite simple: when you encounter n characters of the same type in a row, the compression tool (mzip) will turn that into the number n and a single instance of the character.

Thus, if we had a file with the following contents:

aaaaaaaaaabbbb

the tool would turn it (logically) into:

10a4b

However, the exact format of the compressed file is quite important; here, you will write out a 4-byte integer in binary format followed by the single character in ASCII. Thus, a compressed file will consist of some number of 5-byte entries, each of which is comprised of a 4-byte integer (the run length) and the single character.

To write out an integer in binary format (not ASCII), you should use fwrite(). Read the man page for more details. For mzip, all output should be written to standard output (the stdout file stream, which, as with stdin, is already open when the program starts running).

Note that typical usage of the mzip tool would thus use shell redirection in order to write the compressed output to a file. For example, to compress the file file.txt into a (hopefully smaller) file.z, you would type:

prompt> ./mzip file.txt > file.z

The “greater than” sign is a UNIX shell redirection; in this case, it ensures that the output from mzip is written to the file file.z (instead of being printed to the screen). You’ll learn more about how this works a little later in the course.

The munzip tool simply does the reverse of the mzip tool, taking in a compressed file and writing (to standard output again) the uncompressed results. For example, to see the contents of file.txt, you would type:

prompt> ./munzip file.z

munzip should read in the compressed file (likely using fread()) and print out the uncompressed output to standard output using printf().

Details

  • Correct invocation should pass one or more files via the command line to the program; if no files are specified, the program should exit with return code 1 and print “mzip: file1 [file2 …]” (followed by a newline) or “munzip: file1 [file2 …]” (followed by a newline) for mzip and munzip respectively.
  • The format of the compressed file must match the description above exactly (a 4-byte integer followed by a character for each run).
  • Do note that if multiple files are passed to mzip, they are compressed into a single compressed output, and when unzipped, will turn into a single uncompressed stream of text (thus, the information that multiple files were originally input into mzip is lost). The same thing holds for munzip.

What (and how) to hand in

You will submit your assignment using GitLab. The submission will consist of whatever is contianed in your private linux-utilities repository.

  1. You will need to share your private repository with our GTA Abhishek (his GitLab ID is the same as his mason email ID: aroy6).

  2. Commit all your changes by typing:

     % git commit -am 'the final awesome solution of proj0a: [Your Name] and [Your GMU ID]'
    

And that’s all. We will check the timestamp (your last commit timestamp) for late submission. So make sure to submit before the deadline.

Acknowledgment

The assignment borrows a considerable amount of content from Wisconsin’s CS-537 (Spring 2018). Thanks to Prof. Remzi Arpaci-Dusseau’s support.

Footnotes

1: Unfortunately, there is a lot to learn about the C library, but at some point, you’ve just got to read documentation to learn what is available. Why not now, when you are young? Or, if you are old, why not now, before it’s … ahem … too late?